2DE-pattern contains data on proteins/isoforms/proteoforms
identified on various 2DE maps. You can locate these proteoforms on the classical 2DE maps,
the sectional 2DE maps, or the semi-virtual 2DE maps


Gateways to other related servers: https://www.expasy.org/
http://atlas.topdownproteomics.org     https://www.nextprot.org/
http://www.uniprot.org/     http://www.ibmc.msk.ru/

  1. S. Naryzhny, E. Zorina, A. Kopylov, V. Zgoda, O. Kleyst, A. Archakov. Next Steps on In-Silico 2DE Analyses of Chromosome 18 Proteoforms. J Proteome Res. 2018 17 (12), 4085–4096. doi: 10.1021/acs.jproteome.8b00386. PMID: 30238754
  2. Naryzhny, S. Inventory of proteoforms as a current challenge of proteomics: Some technical aspects. J. Proteomics 2018, S1874-3919(18) 30220-3
  3. E.S.Petrenko, A.T.Kopylov, O.A.Kleyst, O.K.Legina, N.V.Belyakova, R.A.Pantina, S.N.Naryzhny. SEARCHING FOR SPECIFIC MARKERS OF GLIOBLASTOMA: ANALYSIS OF PROTEOFORMS OF GLIOBLASTOMA CELLS. Cell and Tissue Biology 2018,12(6) 455–459
  4. S. Naryzhny. Book title: Electrophoresis - Life Sciences Practical Applications (ISBN: 978-953-51-6104-2) Chapter title: Two-dimensional gel electrophoresis (2DE) as an information base for human proteome. 2018 Chapter 06. 91-106. Publisher: InTech
  5. S. Naryzhny, V. Zgoda, A. Kopylov, E. Petrenko, O. Kleist, А. Archakov. Variety and dynamics of proteoforms in the human proteome: aspects of markers for hepatocellular carcinoma. Proteomes 2017, 5(4), 33 doi:10.3390/proteomes5040033
  6. Naryzhny S, Maynskova M, Zgoda V, Archakov A. Dataset of protein species from human liver. Data in Brief. 2017 May 4; 12: 584-588
  7. Naryzhny S.N. Towards the Full Realization of 2DE Power. Review. Proteomes 2016, 4(4), 33; doi:10.3390/proteomes4040033 (registering DOI).
  8. Naryzhny S, Zgoda V, Kopylov A, Petrenko E, Archakov А. A semi-virtual two dimensional gel electrophoresis: IF-ESI LC-MS/MS. MethodsX. 2017 Aug 31; 4: 260-264. doi: 10.1016/j.mex.2017.08.004. eCollection 2017. MID:28913169
  9. Stanislav Naryzhny, Nikolay Klopov, Natalia Ronzhina, Elena Zorina, Victor Zgoda, Olga Kleyst, Natalia Belyakova, Olga Legina. A database for inventory of proteoform profiles: "2DE-pattern". Electrophoresis 2020, 41(10), 1-7